Genotypic Characterization of Antibiotic-Resistant Genes in Gram Negative Bacteria Isolated from Selected Fish Ponds Effluents Samples within Oyo State doi.org/10.26538/tjnpr/v6i8.24

Main Article Content

Adewale O. Olatayo
Ayantade D. V. Ayansina
Samuel O. Dahunsi
Oluwabukola A. Oroye

Abstract

Extended-spectrum beta-lactamase (ESBL) and carbapenem-resistant bacteria are becoming a rising global public health risk, with food products serving as distribution channels and aquatic ecosystems as prospective storage. The focus of this research therefore is to isolate antibiotics resistant Enterobacteriaceae from selected fish pond effluents in Oyo State. A total of 129 effluents were collected from 42 fish ponds and were cultivated on MacConkey agar. Bacteria were isolated and antibiotic susceptibility of the isolates to Gentamicin, imipenem, meropenem, tetracycline, and cefepime was determined using the disc diffusion method. MDR bacteria were checked for blaCTX-M, blaSHV, blaTEM, blaKPC, blaOXA, and blaNDM resistance genes using polymerase chain reaction (PCR), and isolate with resistance genes were characterized using 16S rRNA sequencing. Forty-six point five (46.5) percent of the 270 Enterobacteriaceae isolates obtained from effluent samples were resistant to imipenem, meropenem (45.7%), and tetracycline (39.4%), cefepime (35.8%), and gentamycin (19.2%). blaSHV was the sole gene found in 13.33 % of the isolates examined by polymerase chain reaction. The detection of ESBL and carbapenemase-producing gram-negative bacteria from selected fish ponds in this study is confirmed and represents a major public health problem. As a result, regular surveillance of antibiotic-resistant bacteria in fish ponds is required to aid disease control and better understand their public health implications.

Article Details

How to Cite
O. Olatayo, A., D. V. Ayansina, A., O. Dahunsi, S., & A. Oroye, O. (2022). Genotypic Characterization of Antibiotic-Resistant Genes in Gram Negative Bacteria Isolated from Selected Fish Ponds Effluents Samples within Oyo State: doi.org/10.26538/tjnpr/v6i8.24. Tropical Journal of Natural Product Research (TJNPR), 6(8), 1305-1310. https://tjnpr.org/index.php/home/article/view/1450
Section
Articles

References

Cabello FC, Godfrey HP, Buschmann AH, Dölz HJ. Aquaculture is yet another environmental gateway to the development and globalization of antimicrobial resistance. Lancet Infect Dis. 2016; 16(7):127–133.

Schmidt AS, Bruun MS, Dalsgaard I, Larsen JL. Incidence, distribution, and spread of tetracycline resistance determinants and integron-associated antibiotic resistance genes among motile aeromonads from a fish farming environment. Appl Environ Microbiol. 2001; 67(12):5675–5682.

Defoirdt T, Sorgeloos P, Bossier P. Alternative to antibiotics for the control of bacterial disease in aquaculture. Curr OpinMicrobiol. 2011; 14(3):251–258.

Hoa PT, Managaki S, Nakada N, Takada H, Shimiz A, Anh DH. Antibiotic contamination and occurrence of antibioticresistant bacteria in aquatic environments of northern Vietnam. Sci Total Environ. 2011; 409(15):2894–2901.

Little DC and Edwards P. Integrated livestock-fish farming systems. Rome: Food and Agriculture Organization of the United Nations; 2003. http://www.fao.org/3/a-y5098e.

Neela FA, Banu NA, Rahman A, Rahman MH, Alam MF. Occurrence of antibiotic-resistant bacteria in pond water associated with integrated poultry-fish farming in Bangladesh. Sains Malaysiana. 2015; 44(3):371–377.

Seiler C and Berendonk TU. Heavy metal-driven coselection of antibiotic resistance in soil and water bodies impacted by agriculture and aquaculture. Front Microbiol. 2012; 3(1):399-347.

Burridge L, Weis JS, Cabello F, Pizarro J, Bostick K. Chemical use in salmon aquaculture: a review of current practices and possible environmental effects. Aquaculture. 2010; 306 (2):7–23.

Buschmann AH, Tomova A, Lopez A, Maldonado MA, Henriquez LA, Ivanova L. Salmon aquaculture and antimicrobial resistance in the marine environment. PLoS One. 2012; 7(1):42724-42730.

Heuer OE, Kruse H, Grave K, Collignon P, Karunasagar I, Angulo FJ. 2009. Human health consequences of use of antimicrobial agents in aquaculture. Clin Infect Dis. 2009; 49(4):1248–1253.

Rhodes G, Huys G, Swings J, Mcgann P, Hiney M, Smith P. Distribution of oxytetracycline resistance plasmids between aeromonads in hospital and aquaculture environments: implication of Tn1721 in the dissemination of the tetracycline resistance determinant Tet A. Appl Environ Microbiol. 2000; 66(5):3883–3890.

Sheu CC, Chang YT, Lin SY, ChengYH HPR. Infections caused by carbapenem-resistant Enterobacteriaceae: An update on therapeutic options. Front Microbiol. 2019;10(1):80.

Wilson H and Török ME. Extended-spectrum β-lactamase producing and carbapenemase-producing Enterobacteriaceae. Microb Genom. 2018; 4(2):7-19.

Bush K and Jacoby GA. Updated functional classification of beta-lactamases. Antimicrob Agents Chemother. 2010;54(3):969–976.

Dandachi I, Chaddad A, Hanna J, Matta J, Daoud Z. Understanding the epidemiology of multi-drug resistant gram-negative bacilli in the Middle East using a one health approach. Front Microbiol. 2019; 10(1):1941-1953.

Exner M, Bhattacharya S, Christiansen B, Gebel J, GoroncyBermes P. Hartemann p. Antibiotic resistance: What is so special about multidrug-resistant gram-negative bacteria?.GMS Hyg Infect Contr. 2017; 12(1):1–24.

Canton R and Ruiz-Garbajosa P. Co-resistance: an opportunity for the bacteria and 2 resistance genes. CurrOpin Pharmacol. 2011; 11(3):477–485.

Laudy E, Róg P, Smolińska-Król K. Prevalence of ESBLproducing Pseudomonas aeruginosa isolates in Warsaw, Poland, detected by various phenotypic and genotypic methods. PLoS One. 2017; 12(1):6-8.

Dehbashi S, Tahmasebi H, Alikhani MY, Keramat F, Arabestani MR. Distribution of Class B and Class A βlactamases in clinical strains of Pseudomonas aeruginosa: comparison of phenotypic methods and high-resolution melting analysis (HRMA) assay. Infect Drug Resist. 2020;

(4):2037–2052.

Clinical and Laboratory Standards Institute (CLSI). Performance standards for antimicrobial susceptibility testing. In: CLSI supplement M100, 27th ed. Clinical and Laboratory Standards Institute, Wayne 2018; 1-332.

Igbinosa I, Beshiru HA, Igbinosa EO. Antibiotic resistance profile of Pseudomonas aeruginosa isolated from aquaculture and abattoir environments in urban communities. Antimicrob Agents Chemother. 2017; 7(1):47–52.

Ejikeugwu C, Esimone I, Iroha P, Eze M, Ugwu D, Adikwu M. Genotypic and phenotypic characterization of MBL genes in Pseudomonas aeruginosa isolates from the non-hospital environment. J Pure Appl Microbiol. 2018; 12(4):1877–1885.

Tapela K and Rahube T. Isolation and antibiotic resistance profiles of bacteria from influent, effluent and downstream: a study in Botswana. Afr J Microbiol Res. 2019; 13(15):279–289.

Falodun OI and Ikusika EO. Extended-spectrum betalacta Pseudomonas species isolated from fish pond water in Ibadan, Nigeria. Int J Environ Stud. 2019; 77(3):34-47.

Onuoha SC. Distribution and antibiogram of bacterial species in effluents from abattoirs in Nigeria. J Environ OccupHealth 2018; 7(1):1–8.

Sheikh J, Jeelani G, Gavali R, Shah R. Weathering and anthropogenic influences on the water and sediment chemistry of wular Lake. Kashmir Himalaya. Environ Earth Sci. 2013; 71(2):20-35.

Uzoigwe CI and Agwa OK. Microbiological quality of water collected from boreholes sited near refuse dumpsites in Port Harcourt, Nigeria. Afr J Biotechnol. 2012; 11(13):3135-3139.

Benie CK, Nathalie DG, Adj´ehi D. Prevalence and antibiotic resistance of Pseudomonas aeruginosa isolated from bovine meat, fresh fish and smoked fish," Arch Clin Microbiol.2017; 8(3):45-56.

Zhang RQ, Ying GG, Su HC, Zhou LJ, Liu YS. Antibiotic resistance and genetic diversity of enterobacteria isolate from traditional and integrated aquaculture in South China. J Environ Sci Health B. 2013; 48(11):999–1013.

Inglis V, Abdullah SZ, Angka SL, Chinabut S, Chowdhury BR, Leano EM, MacRae IH, Sasongko A, Somsiri T, Yambot AV. Survey of resistance to antibacterial agents used in a fish pond in five southeast Asian countries: 331 – 337. In T. W. Flegel and I. H. MacRae (ed.), Diseases in Asian fish

pond III. Fish Health Section, Asian Fish Soc. 1997; Manila, the Philippines.

Elhariri M, Hamza D, Elhelw R, Dorgham SM. "Extendedspectrum beta-lactamase-producing Pseudomonas aeruginosa in camel in Egypt: potential human hazard," Ann Clin Microbiol. 2017; 16(1):21.

Asghar AH and Ahmed OB. Prevalence of aminoglycoside resistance genes in Pseudomonas aeruginosa isolated from a tertiary care hospital in Makkah, KSA. Clin Pract. 2018; 15(2):541–547.

Manna SK, Brahmane MP, Das R, Batabyal K. Occurrence, virulence characteristic, and antimicrobial resistance of Yersinia isolated from fish pond ponds in west Bengal Indian. Lett Appl Microbiol. 2011; 43(4):405-409.

Bali EB, Acik L, Sultan N. Phenotypic and molecular characterization of SHV, TEM, CTX-M and extendedspectrum β-lactamase produced by Escherichia coli, Acinetobacter baumannii, and Klebsiella isolates in a Turkish hospital. Afr J Microbiol Res. 2010; 4(8):650-654.

Larsson DG. Antibiotics in the environment. Ups J Med Sci. 2014; 119:108–112.

Pollett S, Miller S, Hindler J, Uslan D, Carvalho M, Humphries RM. Phenotypic and molecular characteristics of carbapenem-resistant Enterobacteriaceae in a health care system in Los Angeles, California, from 2011 to 2013. J Clin Microbiol. 2014; 52(11):4003-4009.

Mohamed T, Yousef LM, Darweesh EI, Khalil AK, Meghezel EM. Detection and Characterization of Carbapenem-Resistant Enterobacteriaceae in Sohag University Hospitals. Egypt J Med Microbiol. 2018; 27(4):61-69.

Okoche D, Asiimwe BB, Katabazi FA, Kato L, Najjuka CF. Prevalence and Characterization of Carbapenem-Resistant Enterobacteriaceae Isolated from Mulago National Referral Hospital, Uganda. PLOS ONE. 2015; 10(8):0135745.

Juayang, AC, Lim JP, Bonifacio AF. "Five-year antimicrobial susceptibility of Pseudomonas aeruginosa from a local tertiary hospital in Bacolod City, Philippines," Trop Med Int. 2017; 2(3):28.

Goulas B, Livoreil A, Grall N. What are the effective solutions to control the dissemination of antibiotic resistance in the environment? A systematic review protocol. Environ Evid. 2018; 7(1):67-80.

Chikwendu SN, Ibe OA, Okpokwasili GC. Detection of blaSHV and blaTEM beta-lactamase genes in multi-resistant Pseudomonas isolate from environmental sources. Afr. J. Microbiol. Res. 2011; 5(15):2067–2074.

Tew LY, She CH, Chew CH. Isolation, antimicrobial susceptibility profile, and detection of Sul1, blaTEM, and blaSHV in amoxicillin-clavulanate-resistant bacteria isolated from retail sausages in Kampar, Malaysia. Jundishapur J Microbiol. 2016; 9(10):56-69.

Jiang HX, Tang D, Liu YH, Zhang XH, Zeng ZL, Xu L. Prevalence and characteristics of b-lactamase and plasmidmediated quinolone resistance genes in Escherichia coliisolated from farmed fish in China. J Antimicrob Chemother. 2012; 67:2350–2353.

Khan S, Campbell M, Alotaibi K, Smani D, Khan A, Sung K. Molecular typing of Beta-Lactamase and tetracyclineresistant Escherichia coli strains Isolated from imported shrimp. J Bacteriol Mycol. 2019; 6(4):1102.

Miranda I, de Filippis LH, Pinto A. Genotypic characteristics of multidrug-resistant Pseudomonas aeruginosa from hospital wastewater treatment plant in Rio de Janeiro, Brazil. J. Appl. Microbiol. 2015; 118(6):1276–1286