Exploration of Novel Type 2 Antidiabetic Agents: Molecular Docking and Toxicity Assessment of Polyphenolic Compounds for Improved Therapeutic Potential

Main Article Content

Abderrahmane Latigui
Nadia Kambouche Bouzidi
Noureddine Hassini
Sofiane Benmetir

Abstract

Type 2 diabetes (DM2) poses significant global health challenges due to insulin resistance and
impaired glucose metabolism. Dipeptidyl peptidase-4 (DPP4) inhibitors are key
pharmacological agents used to manage DM2, but concerns over side effects prompt exploration
of alternative therapies. This study investigates the potential of polyphenolic compounds as
novel inhibitors of the dipeptidyl peptidase-4 (DPP4) enzyme for type 2 diabetes management.
Polyphenolic ligands, including 3,4-Dicaffeoylquinic Acid, Apiin, Naringin, Cirsiliol,
Cryptochlorogenic Acid, Cirsilineol, and Quercitrin, were subjected to molecular docking with
the DPP4 receptor for the first time using Molecular Operating Environment (MOE) software.
Our analysis reveals compelling binding interactions, with several ligands demonstrating notably
low docking scores compared to synthetic inhibitors. Notably, 3,4-Dicaffeoylquinic Acid, Apiin,
and Naringin exhibited docking scores of -7.7, -7.6, and -7.4, respectively, surpassing
established synthetic inhibitors Sitagliptin (-7.4), Vildagliptin (-6.6), and Saxagliptin (-5.9).
Furthermore, a toxicity assessment of the polyphenolic ligands showed elevated LD50 values,
emphasizing their potential safety. Quinic Acid, 3,4-Dicaffeoylquinic Acid, and Apiin
demonstrated LD50 values of 9800 mg/kg, 5000 mg/kg, and 5000 mg/kg, respectively, with high
toxicity classes indicative of a favourable safety profile. This study signifies a significant
advancement in exploring alternative therapies for type 2 diabetes, underscoring the promising
efficacy and safety of polyphenolic ligands as potential DPP4 inhibitors. The findings highlight
the transformative potential of these natural compounds in reshaping diabetes therapeutics and
warrant further investigation into their molecular mechanisms and therapeutic applications.

Article Details

How to Cite
Latigui, A., Bouzidi, N. K., Hassini, N., & Benmetir, S. (2024). Exploration of Novel Type 2 Antidiabetic Agents: Molecular Docking and Toxicity Assessment of Polyphenolic Compounds for Improved Therapeutic Potential. Tropical Journal of Natural Product Research (TJNPR), 8(7), 7755-7758. https://doi.org/10.26538/tjnpr/v8i7.19
Section
Articles

References

World Health Organization (WHO). Global report on

diabetes. (2016). Retrieved from

https://www.who.int/health-topics/diabetes

DeFronzo RA. Pathogenesis of Type 2 Diabetes

Mellitus. Diabetes Epidemiology, Genetics,

Pathogenesis, Diagnosis, Prevention, and Treatment.

; 181–253. doi:10.1007/978-3-319-45015-5_8

Mahmood I, Al-Mayah Q. The T allele of TCF7L2

rs12255372 G/T Variant Can Predispose to Type 2

Diabetes Mellitus among Iraqi Population. Trop J

Nat Prod Res. 2020; 4(9):535-539.

doi.org/10.26538/tjnpr/v4i9.7

Muhammad S, Muhammad S, Javed B. The Interplay

Between Diabetes, Cardiovascular Disease, and Kidney

Disease. J Diabetes. 2021; (1): 13–

https://doi.org/10.2337/db20211-13

Diana R, Nina W, Juergen E. DPP4 in diabetes. Front

Immunol. 2015; 6: 386.

https://doi.org/10.3389/fimmu.2015.00386

Shanshan W, Sanbao C, Jun Y, Ting C, Yang X, Zhirong Y,

Yuan Z, Linong J, Feng S, Siyan Z. Gastrointestinal

Adverse Events of Dipeptidyl Peptidase 4 Inhibitors in

Type 2 Diabetes: A Systematic Review and Network Metaanalysis. Clin Ther. 2017; 39(9): 1780-1789.

doi.org/10.1016/j.clinthera.2017.07.036

Abd El Aziz M, Cahyadi O, Meier J, Schmidt W, Nauck M.

Incretin‐based glucose‐lowering medications and the risk of

acute pancreatitis and malignancies: a meta‐analysis based

on cardiovascular outcomes trials. Diabetes Obes Metab.

; 22(4): 467-715. doi.org/10.1111/dom.13924

Stéphane Q, Denis D, Casassus D, Laurent P. Plant

Polyphenols: Chemical Properties, Biological Activities,

and Synthesis. Angew Chem Int Ed. 2011; 50(3): 586-621.

doi.org/10.1002/anie.201000044

PubChem, ncbi.nlm.nih.gov, (accessed November, 2023).

RCSB PDB, www.rcsb.org, (accessed November, 2023).

Chemical Computing Group (CCG). Computer-Aided

Molecular Design, www.chemcomp.com, (accessed

November, 2023).

Bouchentouf S and Talebi E. Predicting Binding Between

Main Molecules of Iranian Oliveria decumbens and DPP-4

Enzyme Using Molecular Docking. Trop J Nat Prod Res.

; 2(2):103-105.7

Laksmiani N, Leliqia N, Armita P, Nyoman A, Yoga S,

Prananingtyas K. In-silico and In-vitro Studies of

Antioxidant and Sun Protection Activities of Sappan Wood

(Caesalpinia sappan L.). Trop J Nat Prod Res. 2020;

(12):1072-1080. doi.org/10.26538/tjnpr/v4i12.8

Purnomo Y, Taufiq M, Wijaya AND, Hakim R. Molecular

Docking of Soybean (Glycine max) Seed and Ginger

(Zingiber officinale) Rhizome Components as Anti-Diabetic

Through Inhibition of Dipeptidyl Peptidase 4 (DPP-4) and

Alpha-Glucosidase Enzymes. Trop J Nat Prod Res, 2021;

(10):1735-1742. doi.org/10.26538/tjnpr/v5i10.7

Natraj P, Khajamohiddin S, Jack T. Software for molecular

docking: a review. BIREV. 2017; 9(2): 91-102.

ProTox-II - Prediction of TOXicity of chemicals,

https://tox-new.charite.de/protox_II/, (accessed November

.

Priyanka B, Andreas E, Anna S, Robert P. ProTox-II: a web

server for the prediction of toxicity of chemicals. NAR.

; 46(W1): W257-W263. doi.org/10.1093/nar/gky318

Makiyah S, Usman S, Dwijayanti D. In Silico Toxicity

Prediction of Bioactive Compounds of Dioscorea alata L.

Trop J Nat Prod Res. 2022; 6(10):1587-1596.

www.doi.org/10.26538/tjnpr/v6i10.5

Lui X, Fu Y, Ma Q, Yi J, Cai S. Anti-Diabetic Effects of

Different Phenolic-Rich Fractions from Rhus Chinensis

Mill. Fruits in vitro. eFood. 2021; 2(1): 37-46.

https://doi.org/10.2991/efood.k.210222.002

Patel B, Bhadada S, Ghate M, Design, synthesis and antidiabetic activity of triazolotriazine derivatives as dipeptidyl

peptidase-4 (DPP-4) inhibitors. Bioorg Chem. 2017; 72:

-358. https://doi.org/10.1016/j.bioorg.2017.03.004

Scalbert A, Manach C, Rémésy C, Jiménez L. Dietary

Polyphenols and the Prevention of Diseases. Crit Rev Food

Sci. 2005; 45(4): 287-306.

https://doi.org/10.1080/1040869059096